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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs11579897 chr1:167880085 G/A PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs11580202 chr1:167885634 G/A PRHOXNB chr13:28552243-28562774:- 0.59 7.7 3.87E-10 Box Plot
ACC rs11580404 chr1:167881008 G/A PRHOXNB chr13:28552243-28562774:- 0.59 7.7 3.87E-10 Box Plot
ACC rs11584905 chr1:233182901 C/G PRHOXNB chr13:28552243-28562774:- 0.58 7.95 1.52E-10 Box Plot
ACC rs115970727 chr3:128559179 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs116031172 chr18:37105289 A/G PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs1160594 chr9:8120381 T/C GAS7 chr17:9813926-10101868:- -1 -8.62 1.37E-11 Box Plot
ACC rs11616285 chr13:105322437 G/A PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs11617896 chr13:105321186 A/G PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs11618180 chr13:105321812 A/G PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs11618496 chr13:105322643 A/G PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs11620119 chr13:105321131 G/C PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs116222935 chr2:142866560 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs116431409 chr2:142850810 T/A PRHOXNB chr13:28552243-28562774:- 0.6 8.07 1.0E-10 Box Plot
ACC rs116453847 chr3:116134116 T/A OR6C3 chr12:55725485-55726420:+ 1 9.25 1.45E-12 Box Plot